Cell Ranger7.1 (latest), printed on 05/31/2023
cellranger multi supports a number of library types from the same experiment, including Gene Expression, VDJ T, VDJ B, and Cell Surface Protein Capture.
In order to organize output metrics resulting from multiple libraries and multiple samples, the metrics_summary.csv file has one metric per row and the following columns:
|Category||Categorized the metric based whether it applies to only cell-associated barcodes (
|Grouped By||Describes the categories that a metric may describe/group by. Example categories are
|Group Name||The name of the
|Metric Name||The name of the metric.|
|Metric Value||The value of the metric.|
Refer to the multi pipeline page to learn about running cellranger multi. To continue learning about multi outputs, visit the Filtered Outputs page.