Space Ranger, printed on 02/26/2024
The Visium Spatial Gene Expression Software Suite is a set of software
applications for analyzing and visualizing spatial Gene Expression (GEX) data produced
by the 10x Genomics Visium Platform. The software suite includes Space Ranger and Loupe
Analysis pipelines that perform sample demultiplexing, image
alignment, barcode processing, and gene counting.
|After June 30, 2023, new Space Ranger releases will no longer support Targeted Gene Expression analysis.
What is Space Ranger?
CytAssist Enabled Workflow
Direct Placement for FF
Setup Space Ranger
count for FF
count for FFPE
Spatial GEX (FF)
Questions & Answers
Easy-to-use visualization software that offers interactive support for upstream image processing required for Space Ranger as well as downstream visualization and analysis of your spatial gene expression data. No programming required.
What is Loupe Browser?
CytAssist Image Alignment