Space Ranger, printed on 01/25/2021
The Visium Spatial Gene Expression Software Suite is a set of software
applications for analyzing and visualizing spatial gene expression data produced
by the 10x Visium Platform. The software suite includes Space Ranger and Loupe
Browser:
The 10x set of analysis pipelines that perform sample demultiplexing, image
alignment, barcode processing, and gene counting.
| INTRODUCTION | DOWNLOAD | TUTORIALS |
|
What is Space Ranger? |
Download Links System Requirements Installation |
Loupe Browser |
| RUNNING PIPELINES | ALGORITHMS OVERVIEW | OTHER RESOURCES |
|
Computing Options mkfastq count (Spatial Gene Expression) aggr Understanding Output |
Image Processing Gene Expression |
Questions & Answers Datasets |
The 10x easy-to-use visualization software that lets you quickly and
interactively find significant genes, cell types, and substructure within your
spatial gene expression data. No programming required.
| INTRODUCTION | DOWNLOAD | TUTORIALS |
| What is Loupe Browser? |
Download Link Installation |
Navigation Spatial Gene Expression Manual Slide Alignment |