Cell Ranger , printed on 12/12/2018
The Chromium Single Cell Software Suite is a set of software applications for analyzing and visualizing single cell 3’ RNA-seq data produced by the 10x Chromium Platform. It is also used to analyze data generated from Feature Barcoding technology. The software suite includes:
Cell Ranger: Pipelines
A set of analysis pipelines that perform sample demultiplexing, barcode processing, and single cell 3’ gene counting. Also includes the ability to process data from Feature Barcoding technology.
Loupe Cell Browser
Quickly and interactively find significant genes, cell types, and substructure within your single cell data, no programming required.