10x Genomics
Single Cell ATAC

Cell Ranger ATAC, printed on 12/18/2024

What's New in Loupe Browser 6.2

• Loupe Browser 6.2 introduces support for CytAssist! CytAssist and microscope images can now be aligned using the CytAssist Image Alignment under Visium manual alignment.
• New functionalities to improve Visium Fiducial aligner experience, including:
  • Introduction of QPTIFF support
  • Enabled naming of immunofluorescence channels, which are displayed in Space Ranger output files and Loupe analysis mode
• Reclustering for Gene Expression (GEX) data in GEX + Antibody Capture, GEX + CRISPR Guide Capture, and GEX + ATAC datasets is now available.
• New diverging color scales available for visualizing gene/feature expression.

Past release notes

• 6.1.0
• 6.0.0
• 5.1.0
• 5.0.0
• 4.2.0
• 4.1.0
• 4.0.0
• 3.1.0
• 3.0.1
• 3.0.0
• 2.0.0
• 1.0.5
• 1.0.0