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10x Genomics
Chromium Single Cell Multiome ATAC + Gene Exp.

Multiome Data Concepts

If you've used Loupe Browser before to analyze gene expression or ATAC data, you will find exploring multiome data familiar in some ways, and different in others. The Cell Ranger ARC algorithm documentation covers algorithms and analysis in more detail, but in short, here are some key things to keep in mind when looking at Multiome ATAC + Gene Expression data: