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10x Genomics
Single Cell CNV

Overview of Single Cell CNV Software

The Chromium Single Cell CNV Solution provides a comprehensive, scalable approach to high resolution copy number profiling of hundreds to thousands of cells in a single sample.

In support of this, the Chromium Single Cell CNV Software Suite enables aligning single cell DNA sequencing data produced by a Chromium System to a reference genome and investigating copy number variation (CNV) accurately down to 2Mbp for a single cell, and down to 200kbp for clusters of cells. The visualization tools allow identification and exploration of single cells and groups of cells defined by their mutual similarity. The package includes: