Long Ranger1.x, printed on 10/13/2024
The GemCode Software Suite is a complete package for analyzing and visualizing the Linked-Read sequencing data type produced by the 10x GemCode Platform. The package includes:
Long Ranger: Pipelines
A
set of analysis pipelines that perform sample demultiplexing, barcode
processing, alignment, quality control, variant calling, phasing, and
structural variant calling.
Loupe: Visualization
A
haplotype-enabled genome browser and structural variant visualizer.