Index

Technical Notes

• Cell Type Annotation Strategies for Single Cell ATAC-Seq Data
• Chromium Next GEM Single Cell ATAC v1.1 Reagent, Workflow and Software Updates
• Interpreting Cell Ranger ATAC Web Summary Files for Single Cell ATAC Assay
• Sequencing Metrics & Base Composition of Chromium Single Cell ATAC Libraries

Firmware Upgrades

• Chromium Controller Firmware Release Note
• Chromium Controller Firmware Update Procedure

User Guides

• Chromium Controller Readiness Test
• Chromium Controller Readiness Test with Chromium Next GEM Test Chip
• Chromium Controller Training Kit
• Chromium Next GEM Training Kit User Guide
• Chromium Single Cell ATAC Reagent Kits User Guide (v1 Chemistry)
• Chromium Single Cell ATAC Reagent Kits User Guide (v1.1 Chemistry)
• Chromium Single Cell Controller Readiness Test
• Selecting the Correct Single Cell ATAC User Guide

Specifications

• Chromium Controller Specifications
• Chromium Single Cell Controller Specifications
• Sample Index Sets for Single Cell ATAC
• Sequencing Requirements for Single Cell ATAC

SDS

• Chromium Next GEM Training Kit Safety Data Sheets
• Chromium Single Cell ATAC Reagent Kits Safety Data Sheets (v1 Chemistry)
• Chromium Single Cell ATAC Reagent Kits Safety Data Sheets (v1.1 Chemistry)
• Chromium Training Kit Safety Data Sheets

Getting Started

• Getting Started: Single Cell ATAC
• Next GEM Technology for Single Cell ATAC

Demonstrated Protocols

• Nuclei Isolation for Single Cell ATAC Sequencing
• Nuclei Isolation from Mouse Brain Tissue for Single Cell ATAC Sequencing

Software

• Overview
• System Requirements
• Downloads

Datasets

• Datasets