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Single Cell ATAC Datasets
Chromium Next GEM ATAC Demonstration (v1.1 Chemistry)
Cell Ranger ATAC 1.2.0
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
500 Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
500 Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
1k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
1k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
Cell Ranger ATAC 1.1.0
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (v1.0)
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells (Next GEM v1.1)
500 Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
500 Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
1k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
1k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (v1.0)
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor (Next GEM v1.1)
Single Cell ATAC Demonstration
Cell Ranger ATAC 1.2.0
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor
Fresh cortex, hippocampus, and ventricular zone from embryonic mouse brain (E18)
Dissociated and cryopreserved cortex, hippocampus, and ventricular zone cells from embryonic mouse brain (E18)
Flash frozen cortex, hippocampus, and ventricular zone from embryonic mouse brain (E18)
Fresh cortex from adult mouse brain (P50)
Cell Ranger ATAC 1.1.0
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor
Fresh cortex, hippocampus, and ventricular zone from embryonic mouse brain (E18)
Dissociated and cryopreserved cortex, hippocampus, and ventricular zone cells from embryonic mouse brain (E18)
Flash frozen cortex, hippocampus, and ventricular zone from embryonic mouse brain (E18)
Fresh cortex from adult mouse brain (P50)
Cell Ranger ATAC 1.0.1
500 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
1k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
10k 1:1 mixture of fresh frozen human (GM12878) and mouse (A20) cells
5k Peripheral blood mononuclear cells (PBMCs) from a healthy donor
10k Peripheral blood mononuclear cells (PBMCs) from a healthy donor