Technical Note, Last Modified on April 27, 2022, Permalink
CG000475_TechNote_ChromiumNextGEM_SC3-_CMOWebSummary_Rev B.pdf
The web summary file (web_summary.html) output by the cellranger multi pipeline is the initial point of reference for determining sample performance in the Chromium Single Cell 3’ Gene Expression with Feature Barcode technology for Cell Multiplexing assay. This Technical Note presents an overview of web summary file interpretation, including the expected metrics and characteristic plots for libraries generated using this assay.